User updates: RNAi Core

February 21, 2013

RNAi USERS:

Libraries

We are planning to replace our siRNA/miRNA libraries with updated versions.  However production of the libraries and processing will take time

Library name Expected delivery Estimated screening availability 
Human miRVana miRNA mimic and inhibitors March April
Human Silencer Select pools* May August
Mouse Silencer pools* June September
Mouse miRVana miRNA mimic and inhibitors TBD TBD

*Custom supplemental siRNAs to update these libraries might arrive later.

 Cherrypicks and followups

At this time we cannot offer cherrypicks for screens already performed.  Discounted followup pricing is still available; contact us for details.

Available Equipment

  • Wellmate (with and without stacker)
  • Envision
  • Odyssey SA
  • Tissue culture hoods
  • Biotek platewasher (must consult with RNAi Core staff before use)

Equipment not available

  • Tissue culture incubators
  • Arrayscan and CatX

Custom aliquotting/robotics usage

Because we are overwhelmed in our recovery efforts, we cannot accommodate any custom aliquotting/robotics usage unless you have already spoken to Chi Yun

Database

The machine that hosted that application, hpcf.nyumc.org, was destroyed in the flood, and is scheduled to be replaced in March.  Please contact us for the format for well/gene identities for screens already performed.  Note that we will need to search these manually.

Moving

The NYU RNAi Core is scheduled to move at the end of May 2013 to the 3rd floor of Skirball.  As a result, operations will be limited from mid-May to mid-June.